Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015851701.1_cds_XP_016511580.1_24301
CDS Infomation

[gene=LOC107828729] [db_xref=GeneID:107828729] [protein=O-acyltransferase WSD1-like] [protein_id=XP_016511580.1] [location=complement(join(27428..27616,28257..28394,29214..29432,30202..30311,30419..30485,31287..31534,32672..33038,34569..34826))] [gbkey=CDS]
Sequence

ATGGAGTCCTCCACTGAACTCATATGTAGAAAACCATTTCTGAAACCAATAGAAACAAAG
AGAAAAACCATAGAAGAGTTGGAAATGGACGTTGAAGAAGAAGAACCATTGAGTCCCACA
GCAAAAATGTTCTTAGATCCAATATTAAATATTCATGTAATGGCCATTATGTTTTGCAAA
ACTAGGATTTCTCCACAGCCTACTAAAGACAAGTTGGTTCATACTTTGCTTAAGCATCCA
CGTTTCACTAGCGTCCTGGTGGTAGATGAAGAAAATGGAGGAGAAATGAAATGGGTACAA
ACAAAAGTTGATTTAAACCACCATATTATAATACCAGAAGTTGATGAAAGTAAGCTGGAA
TTATTATCACCAGAAAAATACATAGAAGATTATGTTCACAATCTTACTAAAACAAATCTT
GACAAATCAAAACCACTATGGGAATTTCATCTTTTGAATATTAAAACTCGTGATGCTGAA
GGTGTGAGCATATTTCGTGCTCATCATTCTCTTGGTGATGGCACTTCTTTAATTTCTCTA
TTATTAGCTTGTACTCGTCAAACTGCTGATGAACTCAAACTTCCTACTATTCCTACCAAG
AAAAGAAGACCTACATATGACTCAGGTAAATCAGAAGTGGAGGGAGGATTATTAGGATTA
TGGGGGTATGTGGTAGCAGTTTGGATTTTCATAAAAATGATTGGGAATACAATAGTGGAC
ATTTTCATGTTCATAGCCACACTTGTATTCTTGAAAGATACAGAAACCCCTATCAATAGT
TTGGCTGCAGATTCCAAGTCTAAAATTAGAAGAATTGTTCATCGGACAATTAGTTTGGAT
GATATGAAGTTGGTCAAAAATGCTTTGAACATGACTGTAAATGATGTTGCCTTGGGAATT
ACTCAAGCTGGTTTATCTAAGTATCTCAACAGGAGATATGCTGTTGGTAAGGAAGACAAG
GGGGACACTGAGGAAAACAACAATCTTCCCTTGGGTATTCGACTTCGTTCTTGTCTTATG
ATAAATTTAAGATCAAAACCAGGAATTCAGGATTTAGCTGATATGATGGAGAAAGGTAGC
AAAGGGAAGTGGGGAGGTTGGGGAAATTGGTTTGGTTGTGCTCTTTTACCATTTAAGATT
GCACTACATGATGATCCTTTAGATTATGTTAAAGAAGCTAAGGCAACCATTGATAGAAAG
AAGAACTCATTTGAAGCTTTGTACACTTTGGTCATGGCAGAATTACTCAGCAAGATATTT
GGCATCAAGGCAGTGAGTGCTATGACTCAGAGAGTATTTTCAAGTGCAACAATTTGCTTC
ACCAACTTGGTTGGACCACAGGAGGAAATTGAGTTTTGTGGCCATCCCTTAGCTTATTTT
GCTCCAACTTCTTATGGCCAACCAAATGCATTGACGATCAATTTCCAAAGCTATATCAAC
AAGATGACTATCGTCCTATCACTTGATGAAAGTGCTATTCCTGATCCACAACAACTACTT
GATGATTTTGAAGATTCTATGAAGCTAATAAAAGATGCTGTTATCGAAAGAGGACTCGTC
AATAATAGAAATGACCAAGAAATGAAAGATATATGA

Peptide Sequence

PEP ID

XP_016511580.1
PEP Infomation

PREDICTED: O-acyltransferase WSD1-like [Nicotiana tabacum]
Sequence

MESSTELICRKPFLKPIETKRKTIEELEMDVEEEEPLSPTAKMFLDPILNIHVMAIMFCK
TRISPQPTKDKLVHTLLKHPRFTSVLVVDEENGGEMKWVQTKVDLNHHIIIPEVDESKLE
LLSPEKYIEDYVHNLTKTNLDKSKPLWEFHLLNIKTRDAEGVSIFRAHHSLGDGTSLISL
LLACTRQTADELKLPTIPTKKRRPTYDSGKSEVEGGLLGLWGYVVAVWIFIKMIGNTIVD
IFMFIATLVFLKDTETPINSLAADSKSKIRRIVHRTISLDDMKLVKNALNMTVNDVALGI
TQAGLSKYLNRRYAVGKEDKGDTEENNNLPLGIRLRSCLMINLRSKPGIQDLADMMEKGS
KGKWGGWGNWFGCALLPFKIALHDDPLDYVKEAKATIDRKKNSFEALYTLVMAELLSKIF
GIKAVSAMTQRVFSSATICFTNLVGPQEEIEFCGHPLAYFAPTSYGQPNALTINFQSYIN
KMTIVLSLDESAIPDPQQLLDDFEDSMKLIKDAVIERGLVNNRNDQEMKDI

Transcript Sequence

Gene sequence data has not been registered.